longestOnly
true
false
[default: false]
(i.e., do you want the concept recognizer to match the longest sentence only or not.)
wholeWordOnly
true
false
[default: true]
(i.e., do you want the concept recognizer to match whole word only.)
stopWords
[default: empty]
(i.e., list of stop words to use (i.e., not to use for annotation) separated with comma (without spaces) e.g., in,am,be,is.
withDefaultStopWords
true
false
[default: false]
(i.e., do you want to use our default stop word list available here: /obs/stopwords . This cancel the above one.)
minTermSize
[default: 0]
(i.e., the minimum size (or equal) a term must have to be included in the annotations.)
scored
true
false
[default: true]
(i.e., do you want the annotations to be scored by relevance.)
withSynonyms
true
false
[default: true]
(i.e., do you want to keep the annotations done with synonyms terms or not.)
localOntologyIDs
[default: all]
(i.e., list of ontologies you want to use separated with comma (without spaces) e.g., SNOMEDCT,NCI,MSH.
You can find the list of localOntologyIDs available here: /obs/ontologies )
localSemanticTypeIDs
[default: all]
(i.e., list of UMLS semantic types you want to use separated with comma (without spaces) e.g., T047,T048,T191.
You can find the list of localSemanticTypeIDs available here: /obs/semanticTypes )
levelMin
[default: 0]
levelMax
[default: 0]
(i.e., the level you want the isa-transitive-closure expansion component to be restricted to.)
activateMappings
true
false
[default: false]
(i.e., do you want to use mappings is the semantic expansion.)
mappingTypes
[default: all]
(i.e., list of mapping types you want to use for the mapping expansion component separated with comma (without spaces) e.g., inter-cui,from-mrrel.
You can find the list of mapping types available here: /obs/mappingTypes ). Note if you use the keyword null in your list, it will disable the mapping expansion component.